Materials

Here is a preliminary plan of lectures for this year (the topics and their order may change).

2026-02-19
- ALL (TV,BB) Introduction to the course Survey · Contact · Introduction · Rules · Connecting to server · Editors · Command-line basics
- ALL (TV) Introduction to Perl Lecture · Homework
2026-02-26
- ALL (BB) Command-line tools, Perl one-liners Lecture · Homework
2026-03-05
- ALL (TV) Job scheduling and make Lecture · Homework
2026-03-12
- ALL Introduction to projects
- ALL (TV) SQL (and Python) for beginners
2026-03-19
- INF/DAV (AG) Python, web crawling, HTML parsing, sqlite3
- BIN (LD) Bioinformatics 1 (sequencing and genome assembly)
2026-03-26 Midterm test
2026-04-02 Easter
2026-04-09
- INF/DAV (AG) Text data processing, flask
- BIN (LD) Bioinformatics 2 (gene finding, RNA-seq)
2026-04-16
- INF/DAV (AG) Data visualization in JavaScript
- BIN (LD) Bioinformatics 3 (genome variants)
- ALL Project proposals due Monday April 13
2026-04-23
- ALL (BB) Python + C++
2026-04-30
- ALL (AG) Parallel computing
2026-05-07
- ALL (Guest lecturer) Additional topics
2026-05-14 No lecture
2026-05-21 No lecture
Optional introduction to R If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
- ALL Tutorial to R and basic plotting
- ALL Statistical tests in R