Materials

Here is a preliminary plan of lectures for this year (the topics and their order may change).

• 2026-02-19
  • ALL (BB) Introduction to the course
  • ALL (BB) Introduction to Perl
• 2026-02-26
  • ALL (BB) Command-line tools, Perl one-liners
• 2026-03-05
  • ALL (TV) Job scheduling and make
• 2026-03-12
  • ALL Introduction to projects
  • ALL (TV) SQL (and Python) for beginners
• 2026-03-19
  • INF/DAV (AG) Python, web crawling, HTML parsing, sqlite3
  • BIN (LD) Bioinformatics 1 (sequencing and genome assembly)
• 2026-03-26
  • INF/DAV (AG) Text data processing, flask
  • BIN (LD) Bioinformatics 2 (gene finding, RNA-seq)
• 2026-04-02 Easter
• 2026-04-09
  • INF/DAV (AG) Data visualization in JavaScript
  • BIN (LD) Bioinformatics 3 (genome variants)
  • ALL
• 2026-04-16
  • ALL (BB) Python + C++
• 2026-04-23
  • ALL (AG) Parallel computing
• 2026-04-30
  • ALL (Guest lecturer) Additional topics
• 2026-05-07 No lecture
• 2026-05-14 No lecture
• 2026-05-21 No lecture
• Optional introduction to R If you are interested in R language, you can look at these lectures and homeworks. Files for the tasks are available on the server. However do not submit these homeworks.
  • ALL Tutorial to R and basic plotting
  • ALL Statistical tests in R